Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC008751.2-201ENST00000597885 980 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AL451044.1-201ENST00000604867 238 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AC012314.7-201ENST00000619693 93 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AP003485.2-201ENST00000623636 610 ntBASIC3.81□□□□□ -1.8
PDX1P52945 AC073530.2-201ENST00000623987 261 ntBASIC3.81□□□□□ -1.8
PDX1P52945 FAM157B-203ENST00000639350 358 ntBASIC3.81□□□□□ -1.8
PDX1P52945 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
PDX1P52945 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PDX1P52945 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDX1P52945 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 AC024560.2-201ENST00000507981 1497 ntBASIC3.8□□□□□ -1.8
PDX1P52945 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.8□□□□□ -1.8
PDX1P52945 MIR7-3-201ENST00000384898 110 ntBASIC3.8□□□□□ -1.8
PDX1P52945 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
PDX1P52945 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AC073264.1-201ENST00000411508 416 ntBASIC3.8□□□□□ -1.8
PDX1P52945 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 AC096632.1-201ENST00000427395 310 ntBASIC3.8□□□□□ -1.8
PDX1P52945 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
PDX1P52945 Z77249.1-201ENST00000444622 1175 ntBASIC3.8□□□□□ -1.8
PDX1P52945 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 MTCO1P48-201ENST00000448024 1096 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AC104073.1-201ENST00000451988 151 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.8□□□□□ -1.8
PDX1P52945 AL136126.1-201ENST00000473603 402 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AC025445.1-201ENST00000502728 300 ntBASIC3.8□□□□□ -1.8
PDX1P52945 VWA8P1-201ENST00000510889 176 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.8□□□□□ -1.8
PDX1P52945 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 SLC2A13P1-201ENST00000531560 322 ntBASIC3.8□□□□□ -1.8
PDX1P52945 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.8□□□□□ -1.8
PDX1P52945 YWHAQP7-201ENST00000603536 658 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AL357094.1-201ENST00000603845 844 ntBASIC3.8□□□□□ -1.8
PDX1P52945 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.8□□□□□ -1.8
PDX1P52945 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.8□□□□□ -1.8
PDX1P52945 MIR6715B-201ENST00000637172 77 ntBASIC3.8□□□□□ -1.8
PDX1P52945 AL773545.4-201ENST00000637262 310 ntBASIC3.8□□□□□ -1.8
PDX1P52945 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 AL513478.4-201ENST00000641636 310 ntBASIC3.8□□□□□ -1.8
PDX1P52945 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
PDX1P52945 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDX1P52945 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 CDR1-202ENST00000625883 1485 ntBASIC3.79□□□□□ -1.8
PDX1P52945 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 AC104454.1-201ENST00000421341 1401 ntBASIC3.79□□□□□ -1.8
PDX1P52945 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.79□□□□□ -1.8
PDX1P52945 AL592437.2-201ENST00000421655 2434 ntBASIC3.79□□□□□ -1.8
PDX1P52945 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PDX1P52945 Y_RNA.311-201ENST00000365068 96 ntBASIC3.79□□□□□ -1.8
PDX1P52945 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PDX1P52945 SNORA3C-201ENST00000408792 125 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.79□□□□□ -1.8
PDX1P52945 AC068533.1-201ENST00000418542 415 ntBASIC3.79□□□□□ -1.8
PDX1P52945 Z97055.1-201ENST00000419730 712 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.79□□□□□ -1.8
PDX1P52945 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 RPS25P9-201ENST00000435591 252 ntBASIC3.79□□□□□ -1.8
PDX1P52945 CYCSP43-201ENST00000438233 310 ntBASIC3.79□□□□□ -1.8
PDX1P52945 MTCYBP31-201ENST00000438855 1122 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.79□□□□□ -1.8
PDX1P52945 AL451050.1-201ENST00000450126 415 ntBASIC3.79□□□□□ -1.8
PDX1P52945 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 RPL7P49-201ENST00000471402 708 ntBASIC3.79□□□□□ -1.8
PDX1P52945 RPL7P18-201ENST00000478965 734 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.79□□□□□ -1.8
PDX1P52945 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms