Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU6-549P-201ENST00000384433 107 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 SNORD17-201ENST00000390930 237 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 MTCO2P31-201ENST00000402702 684 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC008280.1-201ENST00000418851 412 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 RPL31P45-201ENST00000419532 356 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC009237.2-201ENST00000421358 284 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC010655.1-201ENST00000449336 292 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 CYCSP35-201ENST00000451978 304 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 TVP23BP2-201ENST00000455082 615 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 snoU109.3-201ENST00000459477 145 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC078785.3-201ENST00000476607 425 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 RPL21P103-201ENST00000479921 488 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC012170.1-201ENST00000495139 359 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 PRELID3BP6-201ENST00000503839 571 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC118282.2-201ENST00000508739 374 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 PTGES3P3-201ENST00000511479 482 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 RNU6-1231P-201ENST00000517185 103 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 AP006245.1-201ENST00000522549 120 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 AP001207.1-201ENST00000524051 481 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC118942.1-201ENST00000529674 1035 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.32□□□□□ -1.88
EFNA3P52797 PDCL2P2-201ENST00000533651 189 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EFNA3P52797 AC044913.1-201ENST00000557200 430 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC005412.1-201ENST00000580812 1049 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC022069.1-201ENST00000582910 658 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC006116.10-201ENST00000591836 581 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.32□□□□□ -1.88
EFNA3P52797 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 AL159169.3-201ENST00000608871 561 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC121761.2-201ENST00000617300 689 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC069209.1-201ENST00000619282 651 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 MIR7975-201ENST00000619350 68 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 MIR4496-201ENST00000635896 61 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EFNA3P52797 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
EFNA3P52797 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EFNA3P52797 ZNF33CP-201ENST00000432492 2030 ntBASIC3.32□□□□□ -1.88
EFNA3P52797 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
EFNA3P52797 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
EFNA3P52797 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EFNA3P52797 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC000367.1-201ENST00000452711 1766 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EFNA3P52797 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
EFNA3P52797 ELL2P4-201ENST00000446870 1376 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AL645568.2-201ENST00000432815 1337 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EFNA3P52797 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 RNU6-298P-201ENST00000390888 96 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 VN1R51P-201ENST00000411675 945 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 MTCYBP32-201ENST00000427945 1084 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 Z77249.1-201ENST00000444622 1175 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
EFNA3P52797 SNORD108-201ENST00000459332 71 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 RN7SL93P-201ENST00000463035 293 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 PLGLA-201ENST00000465668 449 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC026414.1-201ENST00000504046 698 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC048346.1-201ENST00000510247 144 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.31□□□□□ -1.88
EFNA3P52797 SNORA19.3-201ENST00000516165 130 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AL133457.1-201ENST00000564251 987 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.31□□□□□ -1.88
EFNA3P52797 AC245884.10-201ENST00000597355 337 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC115621.1-201ENST00000604653 858 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AL583856.2-201ENST00000606298 543 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 AC092354.2-201ENST00000607786 514 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.31□□□□□ -1.88
EFNA3P52797 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
EFNA3P52797 AC006504.1-201ENST00000562493 3666 ntBASIC3.31□□□□□ -1.88
EFNA3P52797 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms