Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 HAUS1P1-201ENST00000505275 832 ntBASIC4□□□□□ -1.77
MSH6P52701 AC034244.2-201ENST00000514668 858 ntBASIC4□□□□□ -1.77
MSH6P52701 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4□□□□□ -1.77
MSH6P52701 AC084373.1-201ENST00000603311 235 ntBASIC4□□□□□ -1.77
MSH6P52701 AC007566.2-201ENST00000603642 413 ntBASIC4□□□□□ -1.77
MSH6P52701 PNPT1P2-201ENST00000456768 2050 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MSH6P52701 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
MSH6P52701 RNU6-152P-201ENST00000384037 107 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AL159169.1-201ENST00000421119 127 ntBASIC3.99□□□□□ -1.77
MSH6P52701 GTF2IP23-201ENST00000423746 351 ntBASIC3.99□□□□□ -1.77
MSH6P52701 RWDD4P2-201ENST00000426392 563 ntBASIC3.99□□□□□ -1.77
MSH6P52701 MTCO1P57-201ENST00000432182 261 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH6P52701 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH6P52701 RWDD4P1-201ENST00000488019 565 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH6P52701 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
MSH6P52701 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH6P52701 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH6P52701 ATP5F1P5-201ENST00000526403 760 ntBASIC3.99□□□□□ -1.77
MSH6P52701 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AC245128.3-201ENST00000594721 748 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH6P52701 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH6P52701 AC016911.1-201ENST00000613297 452 ntBASIC3.99□□□□□ -1.77
MSH6P52701 RPL23AP61-201ENST00000623642 466 ntBASIC3.99□□□□□ -1.77
MSH6P52701 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH6P52701 PHKBP1-201ENST00000450951 1951 ntBASIC3.99□□□□□ -1.77
MSH6P52701 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MSH6P52701 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH6P52701 AL445437.1-201ENST00000623157 3087 ntBASIC3.98□□□□□ -1.77
MSH6P52701 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH6P52701 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.98□□□□□ -1.77
MSH6P52701 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MSH6P52701 SNORD56.3-201ENST00000363507 71 ntBASIC3.98□□□□□ -1.77
MSH6P52701 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.98□□□□□ -1.77
MSH6P52701 AL138827.1-201ENST00000402666 306 ntBASIC3.98□□□□□ -1.77
MSH6P52701 RNA5SP21-201ENST00000410917 96 ntBASIC3.98□□□□□ -1.77
MSH6P52701 RAP1BP1-201ENST00000412709 553 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AL512504.1-201ENST00000415494 778 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.98□□□□□ -1.77
MSH6P52701 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MSH6P52701 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.98□□□□□ -1.77
MSH6P52701 CBX1P4-201ENST00000439415 457 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AC010468.1-201ENST00000461022 817 ntBASIC3.98□□□□□ -1.77
MSH6P52701 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.98□□□□□ -1.77
MSH6P52701 RN7SL20P-201ENST00000488827 297 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.98□□□□□ -1.77
MSH6P52701 PCNAP1-201ENST00000505363 709 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AC090312.2-201ENST00000582687 378 ntBASIC3.98□□□□□ -1.77
MSH6P52701 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.98□□□□□ -1.77
MSH6P52701 AC103798.2-201ENST00000624292 632 ntBASIC3.98□□□□□ -1.77
MSH6P52701 AC092608.2-201ENST00000624427 218 ntBASIC3.98□□□□□ -1.77
MSH6P52701 BX005019.1-201ENST00000561881 1810 ntBASIC3.98□□□□□ -1.77
MSH6P52701 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH6P52701 AP003122.5-201ENST00000527668 3766 ntBASIC3.97□□□□□ -1.77
MSH6P52701 AL049555.1-201ENST00000562834 1933 ntBASIC3.97□□□□□ -1.77
MSH6P52701 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.97□□□□□ -1.77
MSH6P52701 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MSH6P52701 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MSH6P52701 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MSH6P52701 AL592494.2-201ENST00000425455 1548 ntBASIC3.97□□□□□ -1.77
MSH6P52701 RAD1P1-201ENST00000231383 813 ntBASIC3.97□□□□□ -1.77
MSH6P52701 AL034374.1-201ENST00000406329 351 ntBASIC3.97□□□□□ -1.77
MSH6P52701 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.97□□□□□ -1.77
MSH6P52701 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MSH6P52701 AC005189.1-201ENST00000431286 310 ntBASIC3.97□□□□□ -1.77
MSH6P52701 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
MSH6P52701 IFNWP4-201ENST00000453148 294 ntBASIC3.97□□□□□ -1.77
MSH6P52701 AL136097.1-201ENST00000456945 913 ntBASIC3.97□□□□□ -1.77
MSH6P52701 AC092045.1-201ENST00000495716 1231 ntBASIC3.97□□□□□ -1.77
MSH6P52701 Y_RNA.673-201ENST00000516306 88 ntBASIC3.97□□□□□ -1.77
MSH6P52701 RNA5SP148-201ENST00000516527 94 ntBASIC3.97□□□□□ -1.77
MSH6P52701 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MSH6P52701 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.97□□□□□ -1.77
MSH6P52701 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
MSH6P52701 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.97□□□□□ -1.77
MSH6P52701 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
MSH6P52701 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.97□□□□□ -1.77
MSH6P52701 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
MSH6P52701 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.78
MSH6P52701 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MSH6P52701 RNU1-112P-201ENST00000364401 164 ntBASIC3.96□□□□□ -1.78
MSH6P52701 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MSH6P52701 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MSH6P52701 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.96□□□□□ -1.78
MSH6P52701 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.96□□□□□ -1.78
MSH6P52701 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.96□□□□□ -1.78
MSH6P52701 BX276092.3-201ENST00000424182 230 ntBASIC3.96□□□□□ -1.78
MSH6P52701 DUTP6-201ENST00000425573 462 ntBASIC3.96□□□□□ -1.78
MSH6P52701 AL603825.1-201ENST00000438481 80 ntBASIC3.96□□□□□ -1.78
MSH6P52701 CACYBPP1-201ENST00000438592 684 ntBASIC3.96□□□□□ -1.78
MSH6P52701 RPL29P29-201ENST00000448725 423 ntBASIC3.96□□□□□ -1.78
MSH6P52701 NDUFS5P3-201ENST00000450668 321 ntBASIC3.96□□□□□ -1.78
MSH6P52701 RPL5P13-201ENST00000462840 709 ntBASIC3.96□□□□□ -1.78
MSH6P52701 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.96□□□□□ -1.78
MSH6P52701 AP001025.2-201ENST00000490908 477 ntBASIC3.96□□□□□ -1.78
MSH6P52701 RPS29P21-201ENST00000496272 170 ntBASIC3.96□□□□□ -1.78
MSH6P52701 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms