Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 RNU1-35P-201ENST00000362782 153 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AL138880.1-201ENST00000405824 642 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
GTF2A1P52655 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 BX323014.1-201ENST00000412876 237 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 SYF2P2-201ENST00000417620 583 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 BX842559.1-201ENST00000419615 532 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AL445584.1-201ENST00000431451 330 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AL590399.6-201ENST00000446396 307 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 PRDX3P3-201ENST00000447765 522 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 NUTF2P7-201ENST00000453086 375 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 HMGB1P38-201ENST00000490557 577 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AC023424.2-201ENST00000493479 777 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AC021678.1-201ENST00000505195 936 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 CDC42P4-201ENST00000510507 563 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 RNU1-95P-201ENST00000516357 160 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 RNU1-128P-201ENST00000516704 160 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.81□□□□□ -1.96
GTF2A1P52655 OSBPL9P3-201ENST00000534523 595 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AC073657.2-201ENST00000605661 303 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AC012213.4-201ENST00000606457 354 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AC090115.4-201ENST00000609970 188 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.81□□□□□ -1.96
GTF2A1P52655 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
GTF2A1P52655 AP001350.1-201ENST00000601906 1524 ntBASIC2.81□□□□□ -1.96
GTF2A1P52655 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
GTF2A1P52655 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.81□□□□□ -1.96
GTF2A1P52655 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC009501.3-201ENST00000605001 1352 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GTF2A1P52655 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GTF2A1P52655 SNORA70.2-201ENST00000364506 135 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.8□□□□□ -1.96
GTF2A1P52655 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC011753.1-201ENST00000451001 220 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC022336.1-201ENST00000475510 337 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC106707.2-201ENST00000484182 374 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.8□□□□□ -1.96
GTF2A1P52655 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 PAICSP4-201ENST00000517543 1253 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AP003385.6-201ENST00000531603 374 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC007115.1-201ENST00000546853 234 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.8□□□□□ -1.96
GTF2A1P52655 AC006329.2-201ENST00000611491 394 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC092159.4-201ENST00000624944 550 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 AC119674.1-212ENST00000641155 993 ntBASIC2.8□□□□□ -1.96
GTF2A1P52655 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
GTF2A1P52655 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GTF2A1P52655 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
GTF2A1P52655 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
GTF2A1P52655 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.79□□□□□ -1.96
GTF2A1P52655 RNA5SP124-201ENST00000362739 110 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
GTF2A1P52655 SNORA5A-201ENST00000384111 134 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 CASKP1-201ENST00000412870 582 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.79□□□□□ -1.96
GTF2A1P52655 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
GTF2A1P52655 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.79□□□□□ -1.96
GTF2A1P52655 RPL21P23-201ENST00000446654 460 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 UBE2V2P4-201ENST00000447495 259 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.79□□□□□ -1.96
GTF2A1P52655 RPL21P13-201ENST00000488305 481 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 NAMPTP2-201ENST00000505629 1115 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.79□□□□□ -1.96
GTF2A1P52655 SUB1P1-201ENST00000524415 382 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.79□□□□□ -1.96
GTF2A1P52655 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 MIR4276-201ENST00000584832 70 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 AL157817.1-201ENST00000614264 790 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 AC015726.3-201ENST00000624501 418 ntBASIC2.79□□□□□ -1.96
GTF2A1P52655 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
GTF2A1P52655 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.78□□□□□ -1.96
GTF2A1P52655 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 AL359693.1-201ENST00000614959 2407 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 AC025750.1-201ENST00000399891 379 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 HMGN1P24-201ENST00000412282 298 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 HSFY4P-201ENST00000415994 1181 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 Z75741.2-201ENST00000417272 1167 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms