Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.49□□□□□ -2.01
POLR2JP52435 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR2JP52435 AL162274.2-201ENST00000614406 332 ntBASIC2.49□□□□□ -2.01
POLR2JP52435 AC123768.4-201ENST00000616244 701 ntBASIC2.49□□□□□ -2.01
POLR2JP52435 MIR8057-201ENST00000620957 69 ntBASIC2.49□□□□□ -2.01
POLR2JP52435 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
POLR2JP52435 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
POLR2JP52435 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
POLR2JP52435 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.48□□□□□ -2.01
POLR2JP52435 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
POLR2JP52435 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
POLR2JP52435 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
POLR2JP52435 OR52E6-202ENST00000379946 954 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 MT-TP-201ENST00000387461 68 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 SAR1AP2-201ENST00000392696 594 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 MTND4P13-201ENST00000402078 1023 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.48□□□□□ -2.01
POLR2JP52435 AJ239321.1-201ENST00000424255 564 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR2JP52435 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR2JP52435 AL590639.1-201ENST00000456484 337 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 RPL21P8-201ENST00000465083 535 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 AC026427.2-201ENST00000506228 536 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 SNORA31.21-201ENST00000517180 77 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.48□□□□□ -2.01
POLR2JP52435 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR2JP52435 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.48□□□□□ -2.01
POLR2JP52435 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.48□□□□□ -2.01
POLR2JP52435 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR2JP52435 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.48□□□□□ -2.01
POLR2JP52435 AC007423.1-201ENST00000605009 627 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 AC131902.3-201ENST00000611767 581 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
POLR2JP52435 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
POLR2JP52435 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
POLR2JP52435 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR2JP52435 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
POLR2JP52435 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.47□□□□□ -2.01
POLR2JP52435 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
POLR2JP52435 RPL21P133-201ENST00000443666 476 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.47□□□□□ -2.01
POLR2JP52435 AC012181.1-201ENST00000479895 423 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR2JP52435 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR2JP52435 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR2JP52435 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 CKS1BP7-201ENST00000522230 235 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.47□□□□□ -2.01
POLR2JP52435 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.47□□□□□ -2.01
POLR2JP52435 AC022080.3-201ENST00000544433 482 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC234775.3-201ENST00000564612 656 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 MIR4429-201ENST00000580105 73 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC096947.1-201ENST00000603233 470 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 SRGNP1-201ENST00000603392 451 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.47□□□□□ -2.01
POLR2JP52435 AL159169.3-201ENST00000608871 561 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 AC244100.1-202ENST00000621554 382 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.47□□□□□ -2.01
POLR2JP52435 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
POLR2JP52435 OR8B1P-202ENST00000641132 1178 ntBASIC2.47□□□□□ -2.01
POLR2JP52435 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
POLR2JP52435 DCAF13P3-201ENST00000561147 1334 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
POLR2JP52435 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
POLR2JP52435 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
POLR2JP52435 AL356057.3-201ENST00000402607 340 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 RPLP0P7-201ENST00000416050 667 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 HIGD1AP11-201ENST00000438361 280 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.46□□□□□ -2.02
POLR2JP52435 RSL24D1P2-201ENST00000445584 366 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 RPS15AP1-201ENST00000457423 391 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 AC133134.1-201ENST00000466800 359 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 RPL7P49-201ENST00000471402 708 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 KC877373.1-201ENST00000479066 408 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 RPL5P23-201ENST00000496040 868 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.46□□□□□ -2.02
POLR2JP52435 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.46□□□□□ -2.02
POLR2JP52435 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
POLR2JP52435 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.46□□□□□ -2.02
POLR2JP52435 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.46□□□□□ -2.02
POLR2JP52435 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
POLR2JP52435 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
POLR2JP52435 AC025125.1-201ENST00000624743 1922 ntBASIC2.46□□□□□ -2.02
POLR2JP52435 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
POLR2JP52435 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR2JP52435 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
POLR2JP52435 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
POLR2JP52435 AL034374.1-201ENST00000406329 351 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR2JP52435 AL135938.1-201ENST00000443141 297 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 CALM1P2-201ENST00000452941 448 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 AC008280.2-201ENST00000455473 307 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 AC098799.2-201ENST00000509466 868 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 HMGB1P23-201ENST00000518743 568 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 OR5BN1P-201ENST00000532955 829 ntBASIC2.45□□□□□ -2.02
POLR2JP52435 AC079600.2-201ENST00000550076 130 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms