Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 ELL2P3-201ENST00000457883 1602 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NKX2-1P43699 RNA5SP191-201ENST00000362585 102 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 RNU6-989P-201ENST00000362756 107 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 Y_RNA.201-201ENST00000364052 96 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 RPS3AP26-201ENST00000398259 784 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 RN7SKP56-201ENST00000410513 331 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 MTATP6P27-201ENST00000416987 621 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 PSMA6P3-201ENST00000428242 164 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 VN1R108P-201ENST00000431580 830 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 SNRPEP7-201ENST00000438350 220 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 RPL35AP15-201ENST00000468042 339 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC109486.1-201ENST00000486833 374 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 FAM172BP-201ENST00000487497 1089 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC104685.1-201ENST00000502445 371 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC093281.2-201ENST00000510153 597 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 RNU6-759P-201ENST00000516740 103 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC008802.1-201ENST00000519121 791 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC106038.2-201ENST00000520706 568 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC239860.2-201ENST00000525886 270 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC087276.1-201ENST00000529659 480 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL139174.1-201ENST00000531489 886 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AL360157.1-201ENST00000565962 87 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC091042.1-201ENST00000579213 173 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 MIR4737-201ENST00000583979 81 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC010928.3-201ENST00000587712 541 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 AC005255.1-201ENST00000593748 216 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL031320.1-201ENST00000604177 357 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC133644.2-201ENST00000608142 540 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC064801.1-201ENST00000612025 407 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 MIR6891-201ENST00000618788 93 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AL607023.1-201ENST00000620045 248 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 AC087385.3-201ENST00000620477 187 ntBASIC3.49□□□□□ -1.85
NKX2-1P43699 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC244517.1-201ENST00000606030 2086 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 XIAPP3-201ENST00000312918 795 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 Y_RNA.18-201ENST00000362461 102 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 RNU2-15P-201ENST00000410692 191 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-1P43699 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-1P43699 BX119904.4-201ENST00000424402 301 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AL732292.1-201ENST00000426692 226 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 ZYG11AP1-201ENST00000430329 837 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 BMS1P19-201ENST00000433925 393 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-1P43699 TPTE2P5-203ENST00000458118 728 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 RNU7-136P-201ENST00000458819 69 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AP001992.1-205ENST00000462248 379 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 RPS3AP41-201ENST00000462701 778 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 AC092754.2-201ENST00000463506 460 ntBASIC3.48□□□□□ -1.85
NKX2-1P43699 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-1P43699 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-1P43699 AC082651.2-201ENST00000496833 166 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms