Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
FDFT1P37268 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.37□□□□□ -1.87
FDFT1P37268 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.37□□□□□ -1.87
FDFT1P37268 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.37□□□□□ -1.87
FDFT1P37268 AC011468.4-201ENST00000603942 409 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 AC006213.5-201ENST00000619673 288 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 AC039056.2-201ENST00000622261 511 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 AL392088.2-201ENST00000637607 285 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FDFT1P37268 ZNF734P-201ENST00000419494 1534 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 AL355578.1-201ENST00000607405 1328 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
FDFT1P37268 MTND4P34-201ENST00000572715 1371 ntBASIC3.37□□□□□ -1.87
FDFT1P37268 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FDFT1P37268 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
FDFT1P37268 RPL7P26-201ENST00000333817 754 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 U3.11-201ENST00000364476 212 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.36□□□□□ -1.87
FDFT1P37268 RNU6-444P-201ENST00000383988 108 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 RNU6-1181P-201ENST00000384191 106 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 RPL21P66-201ENST00000426566 466 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC092017.2-201ENST00000427600 362 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.36□□□□□ -1.87
FDFT1P37268 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 RPS24P6-201ENST00000452670 400 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 RPS15AP1-201ENST00000457423 391 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
FDFT1P37268 PLGLA-201ENST00000465668 449 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 RPL21P47-201ENST00000483696 477 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC093663.1-201ENST00000497190 394 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 KCTD9P5-201ENST00000504141 1170 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.36□□□□□ -1.87
FDFT1P37268 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
FDFT1P37268 RNU6-1073P-201ENST00000517182 106 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 HIGD1AP6-201ENST00000521833 279 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
FDFT1P37268 AP003385.6-201ENST00000531603 374 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC109635.4-202ENST00000531666 412 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AP000916.1-201ENST00000533869 835 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 UBE2NP1-201ENST00000545592 458 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.36□□□□□ -1.87
FDFT1P37268 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.36□□□□□ -1.87
FDFT1P37268 AC113368.1-201ENST00000603736 382 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC107294.3-201ENST00000609211 526 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AL590282.1-201ENST00000610379 1136 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 AC097460.3-201ENST00000623099 442 ntBASIC3.36□□□□□ -1.87
FDFT1P37268 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FDFT1P37268 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
FDFT1P37268 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
FDFT1P37268 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
FDFT1P37268 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
FDFT1P37268 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 RNU1-70P-201ENST00000362618 164 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 RNU6-481P-201ENST00000384194 107 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 RNA5SP44-201ENST00000410446 133 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 RPL36AP36-201ENST00000418616 301 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC122718.1-201ENST00000439448 744 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.35□□□□□ -1.87
FDFT1P37268 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.35□□□□□ -1.87
FDFT1P37268 RAB11AP1-201ENST00000442978 646 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 NPM1P13-201ENST00000452663 865 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.35□□□□□ -1.87
FDFT1P37268 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.35□□□□□ -1.87
FDFT1P37268 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.35□□□□□ -1.87
FDFT1P37268 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.35□□□□□ -1.87
FDFT1P37268 AC095057.3-201ENST00000567102 1157 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.35□□□□□ -1.87
FDFT1P37268 MIR5186-201ENST00000577504 120 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 PLCE1P1-201ENST00000622094 305 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC006963.1-201ENST00000624003 1052 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
FDFT1P37268 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FDFT1P37268 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
FDFT1P37268 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FDFT1P37268 SRP72P2-201ENST00000344851 1979 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FDFT1P37268 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.34□□□□□ -1.87
FDFT1P37268 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.34□□□□□ -1.87
FDFT1P37268 RNU6-374P-201ENST00000364146 108 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms