Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPL12P46-201ENST00000436610 195 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGA1P17096 AL049830.2-201ENST00000480072 201 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGA1P17096 RN7SKP283-201ENST00000517197 270 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 OR5AK3P-201ENST00000527486 1297 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC022069.1-201ENST00000582910 658 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC017076.1-201ENST00000607613 578 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGA1P17096 AC025034.2-201ENST00000623264 286 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 OR4G1P-202ENST00000641173 1788 ntBASIC2.63□□□□□ -1.99
HMGA1P17096 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGA1P17096 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGA1P17096 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGA1P17096 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGA1P17096 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGA1P17096 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HMGA1P17096 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGA1P17096 AC080125.1-201ENST00000414888 684 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC012498.1-201ENST00000424037 437 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGA1P17096 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGA1P17096 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGA1P17096 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC008280.2-201ENST00000455473 307 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 OR6K1P-201ENST00000456766 971 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGA1P17096 NDUFB4P9-201ENST00000511646 388 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC008413.1-201ENST00000511864 177 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC093755.1-201ENST00000512950 1023 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGA1P17096 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGA1P17096 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
HMGA1P17096 AL157394.1-201ENST00000562983 1224 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC010928.3-201ENST00000587712 541 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 AC010620.2-201ENST00000600135 313 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 LRRC77P-213ENST00000637727 880 ntBASIC2.62□□□□□ -1.99
HMGA1P17096 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGA1P17096 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGA1P17096 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HMGA1P17096 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGA1P17096 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGA1P17096 AC087565.3-202ENST00000642085 1603 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGA1P17096 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGA1P17096 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HMGA1P17096 RNVU1-3-201ENST00000364313 161 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 EIF5P1-201ENST00000400019 1231 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 AL359511.1-201ENST00000402970 211 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RNA5SP129-201ENST00000410276 118 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RN7SKP123-201ENST00000410732 291 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RPS20P25-201ENST00000412447 352 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 FCF1P1-201ENST00000432690 571 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 AL606490.7-201ENST00000433136 191 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGA1P17096 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGA1P17096 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGA1P17096 AC078785.3-201ENST00000476607 425 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RNU1-41P-201ENST00000516161 162 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 RNU1-48P-201ENST00000516400 162 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 CKS1BP7-201ENST00000522230 235 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGA1P17096 AC123904.3-201ENST00000547218 814 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGA1P17096 SNORD53-201ENST00000579969 78 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 MIR4506-201ENST00000584693 77 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGA1P17096 AC103710.3-201ENST00000608157 948 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGA1P17096 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HMGA1P17096 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGA1P17096 ELF2P3-201ENST00000445099 1506 ntBASIC2.61□□□□□ -1.99
HMGA1P17096 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGA1P17096 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGA1P17096 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGA1P17096 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGA1P17096 AC092079.1-201ENST00000558620 1985 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 RSL24D1P4-201ENST00000400938 484 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 MIR887-201ENST00000401258 79 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 PTP4A1P1-201ENST00000420539 515 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 MTCO1P39-201ENST00000426148 480 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 ARF4P2-201ENST00000430209 526 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 RPL23AP74-201ENST00000437246 471 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 CACYBPP1-201ENST00000438592 684 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGA1P17096 OR5H5P-201ENST00000503164 928 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGA1P17096 AC008549.1-201ENST00000512900 643 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms