Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HMGB1P16-201ENST00000447155 540 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC233982.1-201ENST00000451247 436 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC133473.1-201ENST00000455173 299 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC007967.1-201ENST00000455422 1159 ntBASIC3.85□□□□□ -1.79
VTNP04004 AL133477.1-201ENST00000457472 514 ntBASIC3.85□□□□□ -1.79
VTNP04004 AL139824.2-201ENST00000458731 1095 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC084357.1-201ENST00000473404 255 ntBASIC3.85□□□□□ -1.79
VTNP04004 RPS27P23-201ENST00000487608 251 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 AC114322.1-201ENST00000506771 926 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC090071.1-201ENST00000507713 644 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC113347.3-201ENST00000509113 148 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC008885.2-201ENST00000509506 930 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC112673.1-201ENST00000513168 575 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.85□□□□□ -1.79
VTNP04004 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.85□□□□□ -1.79
VTNP04004 RNU2-27P-201ENST00000516185 142 ntBASIC3.85□□□□□ -1.79
VTNP04004 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
VTNP04004 RNU6-579P-201ENST00000516879 102 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC090281.1-201ENST00000523019 276 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.85□□□□□ -1.79
VTNP04004 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.85□□□□□ -1.79
VTNP04004 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.85□□□□□ -1.79
VTNP04004 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.85□□□□□ -1.79
VTNP04004 MTND4P33-201ENST00000556706 766 ntBASIC3.85□□□□□ -1.79
VTNP04004 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.85□□□□□ -1.79
VTNP04004 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.85□□□□□ -1.79
VTNP04004 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.85□□□□□ -1.79
VTNP04004 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.85□□□□□ -1.79
VTNP04004 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.85□□□□□ -1.79
VTNP04004 AC091488.1-201ENST00000604239 660 ntBASIC3.85□□□□□ -1.79
VTNP04004 AC016877.3-201ENST00000606778 504 ntBASIC3.85□□□□□ -1.79
VTNP04004 MIR6864-201ENST00000617935 70 ntBASIC3.85□□□□□ -1.79
VTNP04004 AL359715.5-201ENST00000623431 443 ntBASIC3.85□□□□□ -1.79
VTNP04004 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.85□□□□□ -1.79
VTNP04004 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.85□□□□□ -1.79
VTNP04004 MIR6715B-201ENST00000637172 77 ntBASIC3.85□□□□□ -1.79
VTNP04004 MFSD8-245ENST00000641743 948 ntBASIC3.85□□□□□ -1.79
VTNP04004 OR6C71P-202ENST00000641886 1107 ntBASIC3.85□□□□□ -1.79
VTNP04004 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTNP04004 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
VTNP04004 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.79
VTNP04004 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VTNP04004 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VTNP04004 NACA3P-201ENST00000359690 648 ntBASIC3.84□□□□□ -1.79
VTNP04004 RNU6-984P-201ENST00000363236 109 ntBASIC3.84□□□□□ -1.79
VTNP04004 RNA5SP42-201ENST00000364278 115 ntBASIC3.84□□□□□ -1.79
VTNP04004 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
VTNP04004 AF228730.1-201ENST00000397972 663 ntBASIC3.84□□□□□ -1.79
VTNP04004 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VTNP04004 PRRC2CP1-201ENST00000404428 159 ntBASIC3.84□□□□□ -1.79
VTNP04004 U3.39-201ENST00000408569 239 ntBASIC3.84□□□□□ -1.79
VTNP04004 OR51A3P-201ENST00000413596 924 ntBASIC3.84□□□□□ -1.79
VTNP04004 OR1AA1P-201ENST00000419597 916 ntBASIC3.84□□□□□ -1.79
VTNP04004 RPL21P109-201ENST00000422213 475 ntBASIC3.84□□□□□ -1.79
VTNP04004 MTCO1P3-201ENST00000429327 192 ntBASIC3.84□□□□□ -1.79
VTNP04004 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC005019.1-201ENST00000436455 431 ntBASIC3.84□□□□□ -1.79
VTNP04004 MTND1P26-201ENST00000440488 538 ntBASIC3.84□□□□□ -1.79
VTNP04004 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.84□□□□□ -1.79
VTNP04004 Z73417.1-201ENST00000447373 778 ntBASIC3.84□□□□□ -1.79
VTNP04004 RPL23AP15-201ENST00000450202 459 ntBASIC3.84□□□□□ -1.79
VTNP04004 AC098826.2-201ENST00000452011 651 ntBASIC3.84□□□□□ -1.79
VTNP04004 RN7SL601P-201ENST00000471221 293 ntBASIC3.84□□□□□ -1.79
VTNP04004 AC068587.2-201ENST00000478386 781 ntBASIC3.84□□□□□ -1.79
VTNP04004 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC026427.2-201ENST00000506228 536 ntBASIC3.84□□□□□ -1.79
VTNP04004 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
VTNP04004 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.84□□□□□ -1.79
VTNP04004 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.84□□□□□ -1.79
VTNP04004 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.84□□□□□ -1.79
VTNP04004 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.84□□□□□ -1.79
VTNP04004 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 MIR5195-201ENST00000583555 115 ntBASIC3.84□□□□□ -1.79
VTNP04004 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC113194.1-201ENST00000606037 500 ntBASIC3.84□□□□□ -1.79
VTNP04004 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.84□□□□□ -1.79
VTNP04004 AC009464.1-201ENST00000615731 469 ntBASIC3.84□□□□□ -1.79
VTNP04004 AC090229.1-201ENST00000590983 1609 ntBASIC3.84□□□□□ -1.8
VTNP04004 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VTNP04004 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
VTNP04004 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VTNP04004 snoZ40.1-201ENST00000364540 72 ntBASIC3.83□□□□□ -1.8
VTNP04004 RNU6-413P-201ENST00000384115 107 ntBASIC3.83□□□□□ -1.8
VTNP04004 TAS2R15P-201ENST00000390674 928 ntBASIC3.83□□□□□ -1.8
VTNP04004 SNORA40.2-201ENST00000390847 128 ntBASIC3.83□□□□□ -1.8
VTNP04004 RNA5SP120-201ENST00000410900 112 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms