Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AC068587.1-201ENST00000483613 781 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 PRELID3BP5-201ENST00000508612 460 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND4P03905 RN7SKP13-201ENST00000515933 244 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AP001207.1-201ENST00000524051 481 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AC103843.2-201ENST00000530523 682 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AP000916.1-201ENST00000533869 835 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND4P03905 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND4P03905 MTCYBP28-201ENST00000566728 1132 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AC017100.2-201ENST00000584628 355 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AC245100.7-201ENST00000609678 442 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AC019176.2-201ENST00000611579 315 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AL445493.3-201ENST00000619568 477 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 AC091903.1-201ENST00000624322 454 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND4P03905 AC117529.2-201ENST00000512159 2068 ntBASIC2.84□□□□□ -1.95
MT-ND4P03905 MTND5P19-201ENST00000424872 1794 ntBASIC2.84□□□□□ -1.96
MT-ND4P03905 ZNF285B-201ENST00000561698 1767 ntBASIC2.84□□□□□ -1.96
MT-ND4P03905 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
MT-ND4P03905 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
MT-ND4P03905 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
MT-ND4P03905 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.84□□□□□ -1.96
MT-ND4P03905 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND4P03905 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MT-ND4P03905 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND4P03905 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
MT-ND4P03905 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
MT-ND4P03905 RNU6-481P-201ENST00000384194 107 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 SNORA46-201ENST00000384762 135 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 RNU1-101P-201ENST00000391171 127 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AL445189.1-201ENST00000405722 338 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 MIR1193-201ENST00000408109 78 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 CYCSP19-201ENST00000411715 316 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 HSPE1P1-201ENST00000421494 318 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND4P03905 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AL353705.1-201ENST00000433468 480 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AL035246.1-201ENST00000433554 1255 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND4P03905 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MT-ND4P03905 RBMY2UP-201ENST00000453474 324 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 RPL21P18-201ENST00000469899 480 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 ST13P14-201ENST00000474095 734 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 RPL21P47-201ENST00000483696 477 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 MTCO3P35-201ENST00000485582 781 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND4P03905 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC104619.4-201ENST00000510773 249 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 MTCO2P32-201ENST00000514865 403 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 OR4R3P-201ENST00000525084 838 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AP003717.3-201ENST00000544832 1180 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 GTF2IP22-201ENST00000554443 182 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC095057.3-201ENST00000567102 1157 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.83□□□□□ -1.96
MT-ND4P03905 BNIP3P4-201ENST00000604946 565 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC092354.2-201ENST00000607786 514 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AL591516.1-201ENST00000611326 274 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 AC132825.7-201ENST00000638744 335 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 AC009093.8-201ENST00000641769 292 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.83□□□□□ -1.96
MT-ND4P03905 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND4P03905 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND4P03905 SAGE4P-201ENST00000442271 3381 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND4P03905 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND4P03905 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MT-ND4P03905 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MT-ND4P03905 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
MT-ND4P03905 SNORA5A-201ENST00000384111 134 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 RNU6-1151P-201ENST00000384684 107 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 AC073264.1-201ENST00000411508 416 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 RAB9AP3-201ENST00000412737 573 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND4P03905 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MT-ND4P03905 BMS1P22-201ENST00000414726 313 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 MRPL50P2-201ENST00000416821 482 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 SYF2P2-201ENST00000417620 583 ntBASIC2.82□□□□□ -1.96
MT-ND4P03905 AL121882.1-201ENST00000422893 417 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms