Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 PABPC1P9-201ENST00000426076 1612 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL122126.1-201ENST00000546905 1318 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 MAPK10-253ENST00000641010 4072 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 RPL21P132-201ENST00000331267 462 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RNU6-492P-201ENST00000363035 104 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RNU6-1283P-201ENST00000365314 105 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RHOT1P2-201ENST00000366423 333 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 AC019155.1-201ENST00000382242 574 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RNU6-1151P-201ENST00000384684 107 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RNY3P10-201ENST00000384764 102 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 Y_RNA.604-201ENST00000410574 102 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL160275.2-201ENST00000412010 394 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RPS7P13-201ENST00000413955 498 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC092634.6-201ENST00000418558 192 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RPL36AP36-201ENST00000418616 301 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.72□□□□□ -1.81
LMX1BO60663 MTCYBP5-201ENST00000423752 1135 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.72□□□□□ -1.81
LMX1BO60663 HSFY6P-201ENST00000445573 403 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.72□□□□□ -1.81
LMX1BO60663 RPL23AP35-201ENST00000451906 501 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL133244.1-201ENST00000456007 258 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 NF1P3-201ENST00000457709 450 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RPL23AP12-201ENST00000467573 473 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC108078.3-201ENST00000502633 489 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 SNORA48.10-201ENST00000516965 160 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.72□□□□□ -1.81
LMX1BO60663 OR5G4P-201ENST00000525251 760 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AP001189.2-201ENST00000527320 189 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC087276.1-201ENST00000529659 480 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 OR8R1P-201ENST00000543943 764 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC074029.1-201ENST00000552531 1044 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.72□□□□□ -1.81
LMX1BO60663 SULT1C2P2-201ENST00000562517 294 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC008638.3-201ENST00000603341 463 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 RBM11P1-201ENST00000604951 799 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 AC068276.1-201ENST00000605793 379 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC012603.1-201ENST00000606424 528 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC012360.2-201ENST00000609349 391 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.72□□□□□ -1.81
LMX1BO60663 AL021997.2-201ENST00000615674 271 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.72□□□□□ -1.81
LMX1BO60663 AC025048.6-202ENST00000627667 438 ntBASIC3.72□□□□□ -1.81
LMX1BO60663 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMX1BO60663 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.72□□□□□ -1.81
LMX1BO60663 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LMX1BO60663 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LMX1BO60663 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LMX1BO60663 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.71□□□□□ -1.82
LMX1BO60663 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMX1BO60663 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
LMX1BO60663 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.71□□□□□ -1.82
LMX1BO60663 OR5P1P-201ENST00000299512 925 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 MIR383-201ENST00000362257 73 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 Y_RNA.6-201ENST00000362350 114 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 RNA5SP88-201ENST00000365560 109 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 MIR93-201ENST00000385024 80 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AL022722.2-201ENST00000402519 180 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 MTCO3P31-201ENST00000405526 789 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 FCF1P9-201ENST00000412546 282 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.71□□□□□ -1.82
LMX1BO60663 AL161631.1-201ENST00000417933 486 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AL590609.2-201ENST00000421430 368 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC104651.1-201ENST00000427559 735 ntBASIC3.71□□□□□ -1.82
LMX1BO60663 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms