Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MTATP6P14-201ENST00000455189 673 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AL672167.3-201ENST00000465951 960 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 GAPDHP36-201ENST00000480688 918 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC110792.1-201ENST00000491826 472 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 MTATP6P9-201ENST00000515039 680 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 MTCO3P15-201ENST00000526563 574 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM1O00151 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 BNIP3P5-201ENST00000562290 498 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM1O00151 AC074051.3-201ENST00000570238 358 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 RN7SL703P-201ENST00000578485 302 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC053481.4-201ENST00000583164 216 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC022916.3-201ENST00000592961 742 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC096947.1-201ENST00000603233 470 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AL009028.1-201ENST00000604895 802 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AL121652.1-201ENST00000608851 448 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AP005137.2-201ENST00000609238 400 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.5□□□□□ -1.85
PDLIM1O00151 MIR6500-201ENST00000622700 86 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 AC109454.4-201ENST00000623411 649 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.5□□□□□ -1.85
PDLIM1O00151 ZNF663P-202ENST00000641770 1131 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM1O00151 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
PDLIM1O00151 AL157700.1-201ENST00000561973 1432 ntBASIC3.5□□□□□ -1.85
PDLIM1O00151 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM1O00151 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PDLIM1O00151 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PDLIM1O00151 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDLIM1O00151 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PDLIM1O00151 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PDLIM1O00151 RNU6-441P-201ENST00000384545 106 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 RNU6-628P-201ENST00000410675 107 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.49□□□□□ -1.85
PDLIM1O00151 RPS7P9-201ENST00000414704 586 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 EI24P1-201ENST00000416584 867 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AC093151.1-201ENST00000427711 313 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 Z74696.2-201ENST00000436514 498 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.49□□□□□ -1.85
PDLIM1O00151 MTCYBP42-201ENST00000444653 1130 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.49□□□□□ -1.85
PDLIM1O00151 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 MRPL42P4-201ENST00000453267 443 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 NF1P3-201ENST00000457709 450 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 RPL21P11-201ENST00000461458 483 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PDLIM1O00151 GAPDHP39-201ENST00000481866 979 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 VN1R105P-201ENST00000486595 910 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC079203.1-201ENST00000487972 404 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC020893.1-201ENST00000502452 580 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC108941.1-201ENST00000502853 530 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 DYNLL1P6-201ENST00000503440 264 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC010460.1-201ENST00000507087 466 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC016065.2-201ENST00000514530 444 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM1O00151 AC019227.1-201ENST00000526902 510 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.49□□□□□ -1.85
PDLIM1O00151 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AL163153.1-201ENST00000554223 283 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.49□□□□□ -1.85
PDLIM1O00151 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AGGF1P6-201ENST00000569213 976 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 MIR4286-201ENST00000580651 93 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC090616.5-202ENST00000582111 297 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC007566.2-201ENST00000603642 413 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC112230.1-201ENST00000604342 547 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC112220.2-201ENST00000605513 533 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.49□□□□□ -1.85
PDLIM1O00151 AL354760.1-201ENST00000608357 643 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AL391834.2-201ENST00000609982 546 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 MIR6875-201ENST00000617506 72 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AC084824.4-201ENST00000620106 731 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 AP003485.1-201ENST00000625093 753 ntBASIC3.49□□□□□ -1.85
PDLIM1O00151 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDLIM1O00151 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AC090337.1-201ENST00000579651 2074 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
PDLIM1O00151 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PDLIM1O00151 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDLIM1O00151 RNU6-224P-201ENST00000384055 107 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 SSXP10-201ENST00000402595 565 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 RPL5P18-201ENST00000406671 891 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC027644.1-201ENST00000419595 298 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.48□□□□□ -1.85
PDLIM1O00151 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.48□□□□□ -1.85
PDLIM1O00151 RPS6P14-201ENST00000425165 719 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 AC096632.1-201ENST00000427395 310 ntBASIC3.48□□□□□ -1.85
PDLIM1O00151 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms