Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afb3S4R1G7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afb3S4R1G7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afb3S4R1G7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm3375-201ENSMUST00000203929 796 ntBASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Gm10812-201ENSMUST00000099864 546 ntBASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb3S4R1G7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms