Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.27■□□□□ 0.04
Upk1bQ9Z2C6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.27■□□□□ 0.04
Upk1bQ9Z2C6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.27■□□□□ 0.04
Upk1bQ9Z2C6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Upk1bQ9Z2C6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Gm9731-201ENSMUST00000209480 747 ntBASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk1bQ9Z2C6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk1bQ9Z2C6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk1bQ9Z2C6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms