Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Gm11336-201ENSMUST00000118168 334 ntBASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Mir6982-201ENSMUST00000184354 68 ntBASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne8Q9DC53 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Mir5130-201ENSMUST00000175160 84 ntBASIC17.12■□□□□ 0.33
Cpne8Q9DC53 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.12■□□□□ 0.33
Cpne8Q9DC53 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.12■□□□□ 0.33
Cpne8Q9DC53 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne8Q9DC53 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gm26039-201ENSMUST00000158152 144 ntBASIC17.1■□□□□ 0.33
Cpne8Q9DC53 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.1■□□□□ 0.33
Cpne8Q9DC53 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne8Q9DC53 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Gm45058-201ENSMUST00000205810 766 ntBASIC17.09■□□□□ 0.33
Cpne8Q9DC53 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms