Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp4cQ9D7F7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.65■□□□□ 0.74
Chmp4cQ9D7F7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Chmp4cQ9D7F7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4cQ9D7F7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp4cQ9D7F7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Odf3b-204ENSMUST00000227834 930 ntBASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chmp4cQ9D7F7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Gm21814-202ENSMUST00000203277 873 ntBASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Chmp4cQ9D7F7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp4cQ9D7F7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Chmp4cQ9D7F7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms