Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Gm27463-201ENSMUST00000183569 57 ntBASIC19.31■□□□□ 0.68
Smc3Q9CW03 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.31■□□□□ 0.68
Smc3Q9CW03 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Actl10-202ENSMUST00000226583 1501 ntBASIC19.3■□□□□ 0.68
Smc3Q9CW03 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.3■□□□□ 0.68
Smc3Q9CW03 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Gm13186-201ENSMUST00000118031 316 ntBASIC19.3■□□□□ 0.68
Smc3Q9CW03 Mir5122-201ENSMUST00000175004 89 ntBASIC19.3■□□□□ 0.68
Smc3Q9CW03 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc3Q9CW03 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.29■□□□□ 0.68
Smc3Q9CW03 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc3Q9CW03 Phf7-203ENSMUST00000226565 1971 ntBASIC19.28■□□□□ 0.68
Smc3Q9CW03 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.28■□□□□ 0.68
Smc3Q9CW03 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc3Q9CW03 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smc3Q9CW03 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc3Q9CW03 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc3Q9CW03 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smc3Q9CW03 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc3Q9CW03 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms