Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldnd1Q9CQX5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Gm25406-201ENSMUST00000157599 105 ntBASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldnd1Q9CQX5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldnd1Q9CQX5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldnd1Q9CQX5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms