Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.29■□□□□ 0.2
Trim33Q99PP7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.28■□□□□ 0.2
Trim33Q99PP7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim33Q99PP7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim33Q99PP7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.27■□□□□ 0.2
Trim33Q99PP7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim33Q99PP7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.27■□□□□ 0.19
Trim33Q99PP7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.27■□□□□ 0.19
Trim33Q99PP7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim33Q99PP7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.26■□□□□ 0.19
Trim33Q99PP7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.26■□□□□ 0.19
Trim33Q99PP7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim33Q99PP7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim33Q99PP7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms