Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Nkx6-1Q99MA9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nkx6-1Q99MA9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Auts2-212ENSMUST00000178555 309 ntBASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.35■□□□□ 0.05
Nkx6-1Q99MA9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nkx6-1Q99MA9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Nkx6-1Q99MA9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nkx6-1Q99MA9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms