Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdk9Q99J95 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdk9Q99J95 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdk9Q99J95 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Gm2559-201ENSMUST00000201323 363 ntBASIC16.58■□□□□ 0.24
Cdk9Q99J95 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Cdk9Q99J95 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdk9Q99J95 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Gm37856-201ENSMUST00000191634 999 ntBASIC16.56■□□□□ 0.24
Cdk9Q99J95 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.56■□□□□ 0.24
Cdk9Q99J95 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cdk9Q99J95 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdk9Q99J95 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Dio3-201ENSMUST00000097228 1449 ntBASIC16.55■□□□□ 0.24
Cdk9Q99J95 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Gm12896-201ENSMUST00000118430 226 ntBASIC16.55■□□□□ 0.24
Cdk9Q99J95 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.55■□□□□ 0.24
Cdk9Q99J95 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Prob1-201ENSMUST00000097619 3021 ntBASIC16.55■□□□□ 0.24
Cdk9Q99J95 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdk9Q99J95 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.55■□□□□ 0.24
Cdk9Q99J95 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdk9Q99J95 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdk9Q99J95 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms