Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 AC073314.1-201ENST00000568729 2216 ntBASIC14.22□□□□□ -0.13
RNF183Q96D59 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RNF183Q96D59 UNC93B2-201ENST00000285383 730 ntBASIC14.22□□□□□ -0.13
RNF183Q96D59 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 ECEL1P3-201ENST00000427961 737 ntBASIC14.22□□□□□ -0.13
RNF183Q96D59 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.22□□□□□ -0.13
RNF183Q96D59 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RNF183Q96D59 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.22□□□□□ -0.13
RNF183Q96D59 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF183Q96D59 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RNF183Q96D59 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF183Q96D59 MMP23A-201ENST00000234610 1017 ntBASIC14.21□□□□□ -0.13
RNF183Q96D59 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF183Q96D59 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 AC087499.1-201ENST00000418141 1075 ntBASIC14.21□□□□□ -0.13
RNF183Q96D59 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 AC116562.2-201ENST00000507042 360 ntBASIC14.21□□□□□ -0.13
RNF183Q96D59 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 REXO1L10P-201ENST00000615707 1290 ntBASIC14.21□□□□□ -0.13
RNF183Q96D59 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF183Q96D59 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RNF183Q96D59 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RNF183Q96D59 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RNF183Q96D59 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF183Q96D59 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF183Q96D59 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RNF183Q96D59 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.21□□□□□ -0.14
RNF183Q96D59 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF183Q96D59 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RNF183Q96D59 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RNF183Q96D59 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RNF183Q96D59 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF183Q96D59 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RNF183Q96D59 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.21□□□□□ -0.14
RNF183Q96D59 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 TMEM179-206ENST00000616017 1645 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF183Q96D59 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF183Q96D59 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 RBM17P1-201ENST00000453646 1190 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF183Q96D59 AC026271.3-201ENST00000571884 352 ntBASIC14.2□□□□□ -0.14
RNF183Q96D59 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF183Q96D59 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms