Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Gm15372-201ENSMUST00000120729 834 ntBASIC18.87■□□□□ 0.61
Smc1bQ920F6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc1bQ920F6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.86■□□□□ 0.61
Smc1bQ920F6 Gm2651-201ENSMUST00000203560 838 ntBASIC18.86■□□□□ 0.61
Smc1bQ920F6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.86■□□□□ 0.61
Smc1bQ920F6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.86■□□□□ 0.61
Smc1bQ920F6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Smc1bQ920F6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc1bQ920F6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc1bQ920F6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smc1bQ920F6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc1bQ920F6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms