Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Gm27000-201ENSMUST00000182943 842 ntBASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgc5Q91XW9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc5Q91XW9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Pcdhgc5Q91XW9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc5Q91XW9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgc5Q91XW9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc5Q91XW9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc5Q91XW9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhgc5Q91XW9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Pcdhgc5Q91XW9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc5Q91XW9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms