Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Gm13186-201ENSMUST00000118031 316 ntBASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Gm16061-201ENSMUST00000122167 857 ntBASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Phf7-203ENSMUST00000226565 1971 ntBASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H1fooQ8VIK3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Actl10-202ENSMUST00000226583 1501 ntBASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H1fooQ8VIK3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Gm7213-201ENSMUST00000215977 950 ntBASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H1fooQ8VIK3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms