Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp2a1Q8R429 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atp2a1Q8R429 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp2a1Q8R429 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Mir8098-201ENSMUST00000184011 137 ntBASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Gm44771-201ENSMUST00000206975 626 ntBASIC18.32■□□□□ 0.52
Atp2a1Q8R429 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp2a1Q8R429 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp2a1Q8R429 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Gm13884-201ENSMUST00000118103 829 ntBASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Gm5864-201ENSMUST00000202263 970 ntBASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp2a1Q8R429 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp2a1Q8R429 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp2a1Q8R429 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms