Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Gm27275-201ENSMUST00000184318 272 ntBASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.63■□□□□ 0.25
Slf1Q8R3P9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slf1Q8R3P9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.62■□□□□ 0.25
Slf1Q8R3P9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slf1Q8R3P9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slf1Q8R3P9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
Slf1Q8R3P9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slf1Q8R3P9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms