Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ubqln1Q8R317 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gm10013-201ENSMUST00000106074 672 ntBASIC15.55■□□□□ 0.08
Ubqln1Q8R317 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gm10231-201ENSMUST00000181584 441 ntBASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gm10175-202ENSMUST00000208752 441 ntBASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubqln1Q8R317 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Gm29707-201ENSMUST00000196325 491 ntBASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubqln1Q8R317 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Gm11355-201ENSMUST00000121120 306 ntBASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Gm18421-201ENSMUST00000204122 625 ntBASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubqln1Q8R317 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms