Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Gm13836-201ENSMUST00000121159 501 ntBASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Gm7977-201ENSMUST00000193787 748 ntBASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim29Q8R2Q0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Gm18421-201ENSMUST00000204122 625 ntBASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim29Q8R2Q0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm29707-201ENSMUST00000196325 491 ntBASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim29Q8R2Q0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Gm21559-201ENSMUST00000220638 855 ntBASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Gm8587-201ENSMUST00000076538 843 ntBASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim29Q8R2Q0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms