Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nudcd3Q8R1N4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nudcd3Q8R1N4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nudcd3Q8R1N4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nudcd3Q8R1N4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nudcd3Q8R1N4 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms