Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 LINC01311-201ENST00000565162 1445 ntBASIC30.14■■■□□ 2.42
CFAP43Q8NDM7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
CFAP43Q8NDM7 IFNL4P1-201ENST00000607083 540 ntBASIC30.14■■■□□ 2.41
CFAP43Q8NDM7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CFAP43Q8NDM7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC30.12■■■□□ 2.41
CFAP43Q8NDM7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 AL645929.1-201ENST00000420084 975 ntBASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 MIR3652-201ENST00000579335 131 ntBASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 KRT8P11-201ENST00000409686 1436 ntBASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.11■■■□□ 2.41
CFAP43Q8NDM7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 FAAHP1-202ENST00000446499 1238 ntBASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 GPALPP1-207ENST00000611650 899 ntBASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CFAP43Q8NDM7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 HBZP1-201ENST00000354915 429 ntBASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 AC104417.2-201ENST00000562989 1793 ntBASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CFAP43Q8NDM7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 ZNF815P-204ENST00000434898 1737 ntBASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 CKBP1-201ENST00000565489 1086 ntBASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 AC006538.3-201ENST00000612495 578 ntBASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 AC092119.3-201ENST00000612618 583 ntBASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CFAP43Q8NDM7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms