Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Gm6550-201ENSMUST00000187574 993 ntBASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Gm2756-201ENSMUST00000195851 400 ntBASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shtn1Q8K2Q9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Gm9727-201ENSMUST00000161387 555 ntBASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Gm6089-201ENSMUST00000197666 938 ntBASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shtn1Q8K2Q9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Gm13036-201ENSMUST00000117799 748 ntBASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Gm11780-201ENSMUST00000136880 516 ntBASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 AV026068-213ENSMUST00000223675 1171 ntBASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shtn1Q8K2Q9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Gm7063-201ENSMUST00000186840 981 ntBASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shtn1Q8K2Q9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Gm8097-201ENSMUST00000117903 829 ntBASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shtn1Q8K2Q9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms