Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist3h2bbQ8CGP0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist3h2bbQ8CGP0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist3h2bbQ8CGP0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist3h2bbQ8CGP0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist3h2bbQ8CGP0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.5□□□□□ -0.41
Hist3h2bbQ8CGP0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms