Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Gm20049-201ENSMUST00000219950 730 ntBASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lysmd4Q8CC84 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Gm7638-201ENSMUST00000121348 967 ntBASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lysmd4Q8CC84 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Asic1-205ENSMUST00000228185 1818 ntBASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lysmd4Q8CC84 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lysmd4Q8CC84 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lysmd4Q8CC84 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms