Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim9Q8C7M3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim9Q8C7M3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim9Q8C7M3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim9Q8C7M3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim9Q8C7M3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms