Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smim4Q8C1Q6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Gm715-201ENSMUST00000117865 831 ntBASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smim4Q8C1Q6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim4Q8C1Q6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Gm3375-201ENSMUST00000203929 796 ntBASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim4Q8C1Q6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Smim4Q8C1Q6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms