Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Fam43aQ8BUP8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam43aQ8BUP8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam43aQ8BUP8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam43aQ8BUP8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam43aQ8BUP8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.27■□□□□ 0.52
Fam43aQ8BUP8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms