Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.39■□□□□ 0.37
Rd3Q8BRE0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rd3Q8BRE0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44357-201ENSMUST00000195897 142 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm19658-201ENSMUST00000196231 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44367-201ENSMUST00000196836 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44350-201ENSMUST00000197197 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44390-201ENSMUST00000197533 144 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44313-201ENSMUST00000198018 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44486-201ENSMUST00000198508 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44314-201ENSMUST00000199263 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44394-201ENSMUST00000199558 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44484-201ENSMUST00000199873 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44466-201ENSMUST00000200264 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Gm44359-201ENSMUST00000200671 138 ntBASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.37■□□□□ 0.37
Rd3Q8BRE0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Gm25745-201ENSMUST00000174945 133 ntBASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Mir5131-201ENSMUST00000175426 93 ntBASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rd3Q8BRE0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rd3Q8BRE0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms