Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdhr3Q8BL00 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Timm23-208ENSMUST00000226683 750 ntBASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdhr3Q8BL00 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdhr3Q8BL00 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdhr3Q8BL00 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.33□□□□□ -0.11
Cdhr3Q8BL00 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdhr3Q8BL00 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdhr3Q8BL00 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Actl10-202ENSMUST00000226583 1501 ntBASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Gm10653-202ENSMUST00000139570 835 ntBASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdhr3Q8BL00 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms