Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcal1Q8BJL0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcal1Q8BJL0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcal1Q8BJL0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.45■□□□□ 0.38
Smarcal1Q8BJL0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcal1Q8BJL0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.43■□□□□ 0.38
Smarcal1Q8BJL0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smarcal1Q8BJL0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Gm13418-201ENSMUST00000119097 944 ntBASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcal1Q8BJL0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.4■□□□□ 0.38
Smarcal1Q8BJL0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcal1Q8BJL0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcal1Q8BJL0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcal1Q8BJL0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcal1Q8BJL0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms