Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn3bQ8BHK2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn3bQ8BHK2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Scn3bQ8BHK2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
Scn3bQ8BHK2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Gm4968-201ENSMUST00000071458 858 ntBASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn3bQ8BHK2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms