Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtl3Q6P1Y1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rtl3Q6P1Y1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtl3Q6P1Y1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Gm45328-201ENSMUST00000210942 917 ntBASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rtl3Q6P1Y1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rtl3Q6P1Y1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Gm27357-201ENSMUST00000183754 135 ntBASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms