Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube3Q66PY1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Ank2-226ENSMUST00000189368 339 ntBASIC17.21■□□□□ 0.35
Scube3Q66PY1 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.21■□□□□ 0.35
Scube3Q66PY1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scube3Q66PY1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scube3Q66PY1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Scube3Q66PY1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scube3Q66PY1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Gm10052-201ENSMUST00000168019 960 ntBASIC17.19■□□□□ 0.34
Scube3Q66PY1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Gm7729-201ENSMUST00000050143 801 ntBASIC17.19■□□□□ 0.34
Scube3Q66PY1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scube3Q66PY1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scube3Q66PY1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Gm44430-201ENSMUST00000203376 995 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms