Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.33□□□□□ -0.28
Zic4Q61467 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zic4Q61467 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Zic4Q61467 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Zic4Q61467 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Zic4Q61467 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Zic4Q61467 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.32□□□□□ -0.28
Zic4Q61467 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Zic4Q61467 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Zic4Q61467 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Zic4Q61467 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Zic4Q61467 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.32□□□□□ -0.28
Zic4Q61467 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Zic4Q61467 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Zic4Q61467 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Gm26571-201ENSMUST00000181399 666 ntBASIC13.31□□□□□ -0.28
Zic4Q61467 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.31□□□□□ -0.28
Zic4Q61467 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.31□□□□□ -0.28
Zic4Q61467 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Gm5874-201ENSMUST00000096101 508 ntBASIC13.31□□□□□ -0.28
Zic4Q61467 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.31□□□□□ -0.28
Zic4Q61467 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.31□□□□□ -0.28
Zic4Q61467 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Zic4Q61467 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Zic4Q61467 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.31□□□□□ -0.28
Zic4Q61467 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Zic4Q61467 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.3□□□□□ -0.28
Zic4Q61467 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.3□□□□□ -0.28
Zic4Q61467 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.3□□□□□ -0.28
Zic4Q61467 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.3□□□□□ -0.28
Zic4Q61467 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Zic4Q61467 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.3□□□□□ -0.28
Zic4Q61467 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Zic4Q61467 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Zic4Q61467 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.3□□□□□ -0.28
Zic4Q61467 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms