Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav8d-1Q5R1H8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8d-1Q5R1H8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Mtag2-201ENSMUST00000058665 714 ntBASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8d-1Q5R1H8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav8d-1Q5R1H8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms