Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shox2P70390 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Gm15375-201ENSMUST00000119510 849 ntBASIC16.3■□□□□ 0.2
Shox2P70390 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shox2P70390 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shox2P70390 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shox2P70390 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shox2P70390 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shox2P70390 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.29■□□□□ 0.2
Shox2P70390 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.29■□□□□ 0.2
Shox2P70390 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.29■□□□□ 0.2
Shox2P70390 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shox2P70390 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shox2P70390 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.29■□□□□ 0.2
Shox2P70390 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.29■□□□□ 0.2
Shox2P70390 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shox2P70390 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Shox2P70390 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
Shox2P70390 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.28■□□□□ 0.2
Shox2P70390 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.28■□□□□ 0.2
Shox2P70390 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.28■□□□□ 0.2
Shox2P70390 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shox2P70390 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.28■□□□□ 0.2
Shox2P70390 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.28■□□□□ 0.2
Shox2P70390 Gm5408-201ENSMUST00000197998 747 ntBASIC16.28■□□□□ 0.2
Shox2P70390 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shox2P70390 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.27■□□□□ 0.2
Shox2P70390 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Shox2P70390 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.27■□□□□ 0.2
Shox2P70390 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Gm4974-201ENSMUST00000209974 875 ntBASIC16.27■□□□□ 0.2
Shox2P70390 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.27■□□□□ 0.2
Shox2P70390 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.27■□□□□ 0.2
Shox2P70390 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Shox2P70390 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.27■□□□□ 0.2
Shox2P70390 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shox2P70390 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.27■□□□□ 0.19
Shox2P70390 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Shox2P70390 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Shox2P70390 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Shox2P70390 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Shox2P70390 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Shox2P70390 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shox2P70390 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms