Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.79■□□□□ 0.28
Ybx1P62960 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ybx1P62960 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ybx1P62960 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ybx1P62960 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.78■□□□□ 0.28
Ybx1P62960 Gm7506-201ENSMUST00000207758 815 ntBASIC16.78■□□□□ 0.28
Ybx1P62960 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.78■□□□□ 0.28
Ybx1P62960 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ybx1P62960 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.78■□□□□ 0.28
Ybx1P62960 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.78■□□□□ 0.28
Ybx1P62960 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ybx1P62960 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.77■□□□□ 0.28
Ybx1P62960 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ybx1P62960 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Gm37935-201ENSMUST00000192012 982 ntBASIC16.77■□□□□ 0.28
Ybx1P62960 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ybx1P62960 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.77■□□□□ 0.28
Ybx1P62960 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.77■□□□□ 0.27
Ybx1P62960 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ybx1P62960 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ybx1P62960 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ybx1P62960 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ybx1P62960 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ybx1P62960 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.76■□□□□ 0.27
Ybx1P62960 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ybx1P62960 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.76■□□□□ 0.27
Ybx1P62960 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.76■□□□□ 0.27
Ybx1P62960 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ybx1P62960 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ybx1P62960 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ybx1P62960 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.75■□□□□ 0.27
Ybx1P62960 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ybx1P62960 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.75■□□□□ 0.27
Ybx1P62960 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.75■□□□□ 0.27
Ybx1P62960 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.75■□□□□ 0.27
Ybx1P62960 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.75■□□□□ 0.27
Ybx1P62960 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ybx1P62960 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ybx1P62960 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ybx1P62960 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms