Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sssca1P56873 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sssca1P56873 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.31□□□□□ -0.28
Sssca1P56873 Gm9731-201ENSMUST00000209480 747 ntBASIC13.31□□□□□ -0.28
Sssca1P56873 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Sssca1P56873 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sssca1P56873 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.31□□□□□ -0.28
Sssca1P56873 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Gm20049-201ENSMUST00000219950 730 ntBASIC13.3□□□□□ -0.28
Sssca1P56873 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sssca1P56873 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.3□□□□□ -0.28
Sssca1P56873 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sssca1P56873 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sssca1P56873 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.3□□□□□ -0.28
Sssca1P56873 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.29□□□□□ -0.28
Sssca1P56873 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sssca1P56873 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sssca1P56873 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sssca1P56873 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.29□□□□□ -0.28
Sssca1P56873 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sssca1P56873 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sssca1P56873 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sssca1P56873 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.28□□□□□ -0.28
Sssca1P56873 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.28□□□□□ -0.28
Sssca1P56873 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms