Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NcanP55066 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NcanP55066 Gm13597-201ENSMUST00000121239 375 ntBASIC17.27■□□□□ 0.36
NcanP55066 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NcanP55066 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NcanP55066 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NcanP55066 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.27■□□□□ 0.36
NcanP55066 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NcanP55066 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NcanP55066 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NcanP55066 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NcanP55066 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NcanP55066 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NcanP55066 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NcanP55066 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.26■□□□□ 0.35
NcanP55066 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NcanP55066 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NcanP55066 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NcanP55066 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.26■□□□□ 0.35
NcanP55066 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Gm8825-201ENSMUST00000182565 998 ntBASIC17.26■□□□□ 0.35
NcanP55066 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.26■□□□□ 0.35
NcanP55066 Gm27494-201ENSMUST00000184735 189 ntBASIC17.26■□□□□ 0.35
NcanP55066 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.26■□□□□ 0.35
NcanP55066 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NcanP55066 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NcanP55066 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NcanP55066 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NcanP55066 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NcanP55066 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.25■□□□□ 0.35
NcanP55066 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.25■□□□□ 0.35
NcanP55066 Gm44335-201ENSMUST00000196879 141 ntBASIC17.25■□□□□ 0.35
NcanP55066 Gm44297-201ENSMUST00000198304 141 ntBASIC17.25■□□□□ 0.35
NcanP55066 Gm44346-201ENSMUST00000198851 141 ntBASIC17.25■□□□□ 0.35
NcanP55066 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
NcanP55066 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NcanP55066 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.25■□□□□ 0.35
NcanP55066 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NcanP55066 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
NcanP55066 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.24■□□□□ 0.35
NcanP55066 Gm13365-201ENSMUST00000121188 973 ntBASIC17.24■□□□□ 0.35
NcanP55066 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.24■□□□□ 0.35
NcanP55066 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.24■□□□□ 0.35
NcanP55066 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.24■□□□□ 0.35
NcanP55066 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NcanP55066 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NcanP55066 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NcanP55066 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NcanP55066 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.23■□□□□ 0.35
NcanP55066 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NcanP55066 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Mir1895-201ENSMUST00000122615 79 ntBASIC17.23■□□□□ 0.35
NcanP55066 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NcanP55066 Gm5312-201ENSMUST00000203728 547 ntBASIC17.23■□□□□ 0.35
NcanP55066 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NcanP55066 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms