Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Psmc4P54775 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Psmc4P54775 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.61■□□□□ 0.57
Psmc4P54775 Gm4535-201ENSMUST00000182274 558 ntBASIC18.61■□□□□ 0.57
Psmc4P54775 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.61■□□□□ 0.57
Psmc4P54775 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.61■□□□□ 0.57
Psmc4P54775 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Gm10355-201ENSMUST00000097146 517 ntBASIC18.61■□□□□ 0.57
Psmc4P54775 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Psmc4P54775 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Psmc4P54775 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.61■□□□□ 0.57
Psmc4P54775 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Psmc4P54775 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Gm4995-201ENSMUST00000117247 432 ntBASIC18.6■□□□□ 0.57
Psmc4P54775 Gm14822-201ENSMUST00000122247 291 ntBASIC18.6■□□□□ 0.57
Psmc4P54775 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.6■□□□□ 0.57
Psmc4P54775 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Psmc4P54775 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Psmc4P54775 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.6■□□□□ 0.57
Psmc4P54775 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.6■□□□□ 0.57
Psmc4P54775 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Psmc4P54775 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Psmc4P54775 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Psmc4P54775 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Psmc4P54775 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.59■□□□□ 0.57
Psmc4P54775 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.59■□□□□ 0.57
Psmc4P54775 Gm7506-201ENSMUST00000207758 815 ntBASIC18.59■□□□□ 0.57
Psmc4P54775 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Psmc4P54775 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.59■□□□□ 0.57
Psmc4P54775 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Psmc4P54775 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.59■□□□□ 0.57
Psmc4P54775 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Psmc4P54775 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
Psmc4P54775 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.58■□□□□ 0.57
Psmc4P54775 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Psmc4P54775 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.58■□□□□ 0.56
Psmc4P54775 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.58■□□□□ 0.56
Psmc4P54775 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.58■□□□□ 0.56
Psmc4P54775 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Psmc4P54775 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Psmc4P54775 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Psmc4P54775 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Psmc4P54775 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Gm14140-201ENSMUST00000119999 995 ntBASIC18.57■□□□□ 0.56
Psmc4P54775 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Psmc4P54775 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.57■□□□□ 0.56
Psmc4P54775 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Psmc4P54775 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms